Research Interests: Mass Spectrometry, System Biology, Biological Sciences, Software, Cluster Analysis, and 11 moreArabidopsis, High Pressure Liquid Chromatography, CHEMICAL SCIENCES, High Resolution, Liquid Chromatography / Electrospray Ionization Mass Spectrometry, Biological systems, Plant extracts, Liquid Chromatography, Relative Abundance, Large Scale, and Information Presentation
The identification of metabolites in biochemical studies is a major bottleneck in the proliferating field of metabolomics. In particular in plant metabolomics, given the diversity and abundance of endogenous secondary metabolites in... more
The identification of metabolites in biochemical studies is a major bottleneck in the proliferating field of metabolomics. In particular in plant metabolomics, given the diversity and abundance of endogenous secondary metabolites in plants, the identification of these is not only challenging but also essential to understanding their biological role in the plant, and their value to quality and nutritional attributes as food crops. With the new generation of analytical technologies, in which liquid chromatography (LC)-mass spectrometry (MS) and nuclear magnetic resonance (NMR) play a pioneering role, profiling metabolites in complex extracts is feasible at high throughput. However, the identification of key metabolites remains a limitation given the analytical effort necessary for traditional structural elucidation strategies. The hyphenation of LC-solid phase extraction (SPE)-NMR is a powerful analytical platform for isolating and concentrating metabolites for unequivocal identificat...
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As one of the main phytoalexins and phytoestrogens, glyceollin is an important prenylflavonoid in Glycine max [L.] Merri. (soybean). Many kinds of elicitors can be used to induce its accumulation. Its biosynthesis pathway is commonly used... more
As one of the main phytoalexins and phytoestrogens, glyceollin is an important prenylflavonoid in Glycine max [L.] Merri. (soybean). Many kinds of elicitors can be used to induce its accumulation. Its biosynthesis pathway is commonly used to study the characteristics of prenyltransferase, which catalyzes the prenylated reaction happening in a very few plant families in nature. Glycinol, the direct precursor of glyceollin, is necessary to study the prenylated reaction in soybean. In comparing with the other elicitors to elicit the glycinol accumulation in soybean cotyledons, AgNO3 is the most effective elicitor. Exposure of 6-8 days old cotyledons to 0.01 mol/L AgNO3 and incubation for 24 h result in the accumulation of 256 microg (glycinol)/g (fresh weight). The glycinol was extracted by methanol. Then the isolation and purification were conducted by preparative high performance liquid chromatography. Instead of 100% acetonitrile-0.1% formic acid as the elution system, the extract w...
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Research Interests:
Research Interests: Mass Spectrometry, System Biology, Biological Sciences, Software, Cluster Analysis, and 11 moreArabidopsis, High Pressure Liquid Chromatography, CHEMICAL SCIENCES, High Resolution, Liquid Chromatography / Electrospray Ionization Mass Spectrometry, Biological systems, Plant extracts, Liquid Chromatography, Relative Abundance, Large Scale, and Information Presentation
Research Interests: Analytical Chemistry, Nuclear Magnetic Resonance, Metabolomics, Multivariate Analysis, Time of Flight, and 8 moreMagnetic Resonance, Tomato, Clinical Sciences, Liquid Chromatography / Electrospray Ionization Mass Spectrometry, Component Analysis, Correlation Analysis, Metabolic pathway, and Biochemistry and cell biology
Research Interests: Plant Biology, Mass Spectrometry, Metabolomics, Flavonoids, Saponins, and 20 moreSTEROIDS, Plant Physiology, Plant Secondary Metabolism, Experimental Botany, Fruit, Alkaloids, Terpenes, Tomato, High Performance Liquid Chromatography, Fruit set and development, Integrated Approach, Biological systems, Ascorbic Acid, Liquid Chromatography, Yeast Metabolite Profiling, Ripening, Solanum Lycopersicum, Glycosides, Lycopersicon esculentum, and Plant Epidermis(STEROIDS, Plant Physiology, Plant Secondary Metabolism, Experimental Botany, Fruit, Alkaloids, Terpenes, Tomato, High Performance Liquid Chromatography, Fruit set and development, Integrated Approach, Biological systems, Ascorbic Acid, Liquid Chromatography, Yeast Metabolite Profiling, Ripening, Solanum Lycopersicum, Glycosides, Lycopersicon esculentum, and Plant Epidermis)
(STEROIDS, Plant Physiology, Plant Secondary Metabolism, Experimental Botany, Fruit, Alkaloids, Terpenes, Tomato, High Performance Liquid Chromatography, Fruit set and development, Integrated Approach, Biological systems, Ascorbic Acid, Liquid Chromatography, Yeast Metabolite Profiling, Ripening, Solanum Lycopersicum, Glycosides, Lycopersicon esculentum, and Plant Epidermis)
Identification and quantification of metabolites occurring within specific cell types or single cells of plants and other organisms is of particular interest for natural product chemistry, chemical ecology, and biochemistry in general.... more
Identification and quantification of metabolites occurring within specific cell types or single cells of plants and other organisms is of particular interest for natural product chemistry, chemical ecology, and biochemistry in general. The integration of studies at the gene, transcript, protein and metabolite levels in localized regions will provide useful information for the understanding of biology as a system. In this review, we summarize the latest developments in the analysis of metabolites present in small samples, micrometabolomics, dealing with sample preparation methods, with focus on laser-assisted microdissection, and the analytical technologies used. Mass spectrometry (MS) and nuclear magnetic resonance (NMR) are among the most emergent technologies in metabolomics, enabling the shortest route toward metabolite identification.
Research Interests: Chemical Ecology, Mass Spectrometry, Nuclear Magnetic Resonance, Metabolomics, Magnetic Resonance Spectroscopy, and 13 moreSample Preparation, Biological Sciences, Microdissection, Natural Product, Plants, Single Cell, CHEMICAL SCIENCES, Liquid Chromatography / Electrospray Ionization Mass Spectrometry, Emerging Technology, Cellular Structures and Materials, Small samples, Proteome, and PLANT PROTEINS
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Health is influenced by genetic, lifestyle, and diet determinants; therefore, nutrition plays an essential role in health management. Still, the substantiation of nutritional health benefits is challenged by the intrinsic macro- and... more
Health is influenced by genetic, lifestyle, and diet determinants; therefore, nutrition plays an essential role in health management. Still, the substantiation of nutritional health benefits is challenged by the intrinsic macro- and micronutrient complexity of foods and individual responses. Evidence of healthy effects of food requires new strategies not only to stratify populations according to their metabolic requirements but also to predict and measure individual responses to dietary intakes. The influence of the gut microbiome and its interaction with the host is pivotal to understand nutrition and metabolism. Thus, the modulation of the gut microbiome composition by alteration of food habits has potentialities in health improvement or even disease prevention. Dietary polyphenols are naturally occurring constituents in vegetables and fruits, including coffee and cocoa. They are commonly associated to health benefits, although mechanistic evidence in vivo is not yet fully understood. Polyphenols are extensively metabolized by gut bacteria into a complex series of end-products that support a significant effect on the functional ecology of symbiotic partners that can affect the host physiology. This review reports recent nutritional metabolomics inspections of gut microbiota-host metabolic interactions with a particular focus on the cometabolism of cocoa and coffee polyphenols.
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Systems biology approaches are providing novel insights into the role of nutrition for the management of health and disease. In the present study, we investigated if dietary preference for dark chocolate in healthy subjects may lead to... more
Systems biology approaches are providing novel insights into the role of nutrition for the management of health and disease. In the present study, we investigated if dietary preference for dark chocolate in healthy subjects may lead to different metabolic response to daily chocolate consumption. Using NMR- and MS-based metabolic profiling of blood plasma and urine, we monitored the metabolic response of 10 participants stratified as chocolate desiring and eating regularly dark chocolate (CD) and 10 participants stratified as chocolate indifferent and eating rarely dark chocolate (CI) to a daily consumption of 50 g of dark chocolate as part of a standardized diet over a one week period. We demonstrated that preference for chocolate leads to different metabolic response to chocolate consumption. Daily intake of dark chocolate significantly increased HDL cholesterol by 6% and decreased polyunsaturated acyl ether phospholipids. Dark chocolate intake could also induce an improvement in the metabolism of long chain fatty acid, as noted by a compositional change in plasma fatty acyl carnitines. Moreover, a relationship between regular long-term dietary exposure to a small amount of dark chocolate, gut microbiota, and phenolics was highlighted, providing novel insights into biological processes associated with cocoa bioactives.