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°°LETTER ARTICLE
Construction and functional analysis of the recombinant bacteriocins
Weissellicin-MBF from Weissella confusa MBF8-1
Running title: Recombinant bacteriocins from Weissella confusa
Amarila Malika*, Elita Yuliantiea, Nisa Yulianti Suprahmana, Theresa Linardia, Angelina Wening
Widiyantia, Jeanita Haldya, Catherine Tjiaa, and Hiroshi Takagi**b
a
Division of Pharmaceutical Microbiology and Biotechnology, Faculty of Pharmacy, Universitas Indonesia, UI Depok
Campus, Depok 16424, Indonesia. bDivision of Biological Science, Graduate School of Science and Technology, Nara
Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
1389-2010 /19 $58.00+.00
© 2019 Bentham Science Publishers
2 Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0
Principle Author et al.
Abstract:
ARTICLE HISTORY
Received:
Revised:
Accepted:
DOI:
Background: Bacteriocins (Bac1, Bac2, and Bac3) from Weissella confusa MBF8-1, weissellicinMBF, have been reported as potential alternative substances as well as complements to the existing
antibiotics against many antimicrobial-resistant pathogens. Previously, the genes encoded in the large
plasmid, pWcMBF8-1, and the spermicidal activity of their synthetic peptides, have been studied in
originally discovered Indonesia. Three synthetic bacteriocins peptides of this weissellicin-MBF have
been reported as well for their potential activities, i.e. antibacterial and spermicidal.
Objective: The aim of this study was to construct the recombinant Bacteriocin (r-Bac) genes, as well
as to investigate the genes expressions and their functional analysis.
Method: Here, we constructed the recombinant Bacteriocin (r-Bac) genes and produced the
recombinant peptides (r-Bac1, r-Bac2, and r-Bac3) in B. subtilis DB403 cells in a large scale. After
purification using the His-tag affinity column, their potential bioactivities measured as antibacterial
minimum inhibitory concentrations against Leuconostoc mesenteroides and Micrococcus luteus were
determined.
Results: Pure His-tag-recombinant Bac1, Bac2, and Bac3 were obtained and they could inhibit the
growth of L. mesenteroides and M. luteus.
Conclusion: The recombinant bacteriocin could be obtained although with weak activity in inhibiting
gram-positive bacterial growth.
Keywords: Bacillus subtilis; bacteriocin; recombinant peptide; synthetic peptide; Weissella confusa, weissellicin
Title of the Article
Antimicrobial resistance (AMR) is a major global health
problem. It has been predicted that AMR will cause an
additional 10 million deaths per year and a loss of up to
US$100 trillion from global GDP by 2050 1. In Indonesia,
AMR cases are remarkably high; in 2009, the World Health
Organization stated that Indonesia was on the 8th rank of 27
countries with multidrug resistance 2. Redesign of
antimicrobial compounds from animals, plants, insects, and
bacteria is one of the favorable alternative ways 3.
Bacteriocin, which is a bioactive peptide produced naturally
by lactic acid bacteria (LAB) 4, has been commonly used as
food preservative. However, its mechanism of killing other
bacteria is mostly done by disruption of membrane integrity
and thus thought to be less likely to induce resistance. In
addition, bacteriocin is more active than conventional
antibiotics against the resistant Gram-positive bacteria 5; it
acts in micro to nanomolar concentration, hence is relatively
safe either for human body and environment 3, 6.
Consequently, bacteriocin is extensively evaluated as a
potential novel antimicrobial drug or as a conventional
antibiotics complement 7. For example, nisin has been
reported since decades for its potential use in combination
with peptidoglycan modulating antibiotics, such as
chloramphenicol and bacitracin 8.
New bacteriocins have been identified widely and the genes
encoding have been deposited in DNA database; this could
serve as potential and promising source for the exploitation
of new antimicrobial peptides. However, the low yields, the
*Address correspondence to this author at the Division of Pharmaceutical
Microbiology and Biotechnology, Faculty of Pharmacy, Universitas
Indonesia, UI Depok Campus, Depok 16424, Indonesia.Tel: +62-217270031 / Fax: 62-21-7863433 / E-mail: amarila.malik@ui.ac.id
** Address correspondence to this author at the Division of Biological
Science, Graduate School of Science and Technology, Nara lnstitute of
Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
Tel: +81-743-72-5420 / Fax: +81-743-72-5429 / E-mail: hiro@bs.naist.jp
generation of potential virulence factors from natural
producers and the high cost of synthetic synthesis drives
numerous researchers to utilize genetic engineering to induce
heterologous expression of the bacteriocin. Yet their
potential is difficult to evaluate in the absence of suitable
expression systems; E. coli has been used widely as a
heterologous host to produce recombinant bacteriocins and
has an extensive set of the different expression systems in an
attempt to guarantee successful production of a range of
bacteriocins 9-13.
A LAB Weissella confusa MBF8-1, which was previously
isolated from soya waste in Indonesia 14, showed bacteriocinlike inhibitory substance (BLIS) activity 15. This activity can
inhibit growth of several pathogenic bacteria by performing
deferred antagonism assay (DAA), but its spectrum of
activity is fairly narrow, and was limited to species very
closely related to W. confusa, i.e. Micrococcus luteus T18
and Lactococcus lactis T-21 16. Recently the synthetic
bacteriocin also showed activity to inhibit sperm motility 17.
The genetic locus comprising three putative bacteriocinencoding bac genes, i.e. bac1, bac2, and bac3, and their
related transport complex (bacT and bacE) as well as
putative immunity protein (bacI) for weissellicin MBF, the
MBF8-1 BLIS, is harbored by the plasmid pWcMBF8-1
(AN KR350502). This study aimed to construct a suitable
Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0 3
expression vector to produce large-scale and functional
recombinant bacteriocins (r-Bacs).
W. confusa MBF8-1 used in this study was taken from the
collection of the Laboratory of Pharmaceutical Microbiology
and Biotechnology, Faculty of Pharmacy, Universitas
Indonesia, Depok, Indonesia. W. confusa MBF8-1 was
cultivated at 32C for 18 h in MRS (Difco, Franklin Lakes,
NJ) medium without shaking 16.
Specific oligonucleotides primer pairs targeting three
putative bacteriocin (bac) encoding gene bac1, bac2 and
bac3 in the plasmid pWcMBF8-1 15 were designed from the
annotated draft genome sequence of W. confusa MBF8-1
(AN KR350502) and were analyzed by using OligoAnalyzer
3.1 [http://sg.idtdna.com/calc/analyzer], and Primer BLAST
[http://www.ncbi.nlm.nih.gov/tools/primer-blast]
and
Sequence Manipulation Suite (SMS): Primer Map
[www.bioinformatics.org/sms2/primer_map.html].
These
primers were designed to give final recombinant genes as
follows: the start codon ATG upstream of the first nucleotide
as well as the Shine-Dalgarno (SD) sequence with 7-bp
space to ATG of the bacteriocin gene were placed at the 5’
end and the 3’ end should not have the stop codon but be
directly tagged with 7×His (Fig. 1). The tag sequence was
added for the purpose of cloning, isolation, expression and
purification by GatewayR system (Invitrogen, La Jolla, Ca.
USA). All oligonucleotides used in this study are listed in
Table 1.
The plasmid pWcMBF8-1 was isolated from W. confusa
MBF8-1 according to the method as described previously 16,
18
, and was stored at -20 º C. Polymerase chain reaction
(PCR) was performed for generating pEntry, which was
conducted in two steps according to the GatewayR
manufacturer protocol. Product obtained from the first PCR
was verified by running on a 2% agarose gel in 1×TAE. The
PCR product for further cloning purpose was purified with
PrepEaseR Gel Extraction Kit (Affymetrix USB, USA)
according to manufacturer’s protocol. By using pDONR221
(Invitrogen, La Jolla, Ca. USA) to construct pEntry of each
bac gene, we performed BP-ClonaseIIR according to
manufacturer’s manual. Transformation to E. coli DH5α was
carried out by heat shock method with CaCl2 as described for
GatewayR system (Invitrogen, La Jolla, Ca. USA). To obtain
entry clone, transformant was positively selected on LB agar
medium supplemented with kanamycin (50 μg/ml). To
confirm and verify the correct constructed recombinant
plasmid, randomly chosen clones were subjected to plasmid
purification according to the alkaline lysis method 19,
followed by PCR using pairs of universal pDONRTM primer
as listed in Table 1. The amplicon DNAs were sequenced
and analyzed by using Clustal Omega (https://www.ebi.
ac.uk/Tools/msa/clustalo/) to confirm that no error was
introduced during the recombinatorial cloning process.
Correct entry clones were further processed for LRrecombinatorial cloning using LR-ClonaseR according to
manufacturer’s manual. For the expression of the
recombinant peptide in B. subtilis DB403, we used a shuttle
vector as destination vector, pOXGW 20-21. The LR- reaction
was transformed to competent E. coli DH5α by performing
the same method as mentioned above, and was positively
selected on LB agar plates containing tetracyclin (10 μg/ml).
Transformation of recombinant plasmids pMBF8-1bac1,
pMBF8-1bac2 and pMBF8-1bac3 to B. subtilis DB403 was
4 Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0
carried out by electroporation 22. Before the B. subtilis
DB403 transformants were used for the expression, each
gene was confirmed by PCR by using internal
oligonucleotide primers listed in Table 1, and they showed
the expected size of inserts, i.e. 186 bp, 153 bp and 138 bp
for bac1, bac2, and bac3, respectively (Fig. 2).
The B. subtilis transformants harboring recombinant
plasmids of each bac gene were obtained after PCR
recombinatorial cloning, and designated pMBF8-1bac1,
pMBF8-1bac2 and pMBF8-1bac3. To produce the
recombinant bacteriocins in large scale, use of less expensive
inducer than isopropyl β-D-thiogalactopyranoside would be
preferred. Thus, pOXGW was used as the overexpression
vector in which cloned gene can be induced by xylose. It was
also designed for easy purification by adding 7×His-tag, and
efficient expression in B. subtillis by using the artificial ATG
start codon and the ribosome-binding site. Fig. 1 shows the
structure of the construct.
For the production of the recombinant bacteriocin peptides,
confirmed clones of B. subtilis DB403 were pre-cultured.
Recombinant peptides were produced by heterologous
expression in a 3-L bioreactor flask (New Brunswick
BioFloR/CelliGenR 115, Eppendorf, Hamburg, Germany).
One-liter of LB broth medium containing tetracycline (10
μg/ml) was used and was cultured at 30 °C with agitation
100 rpm to reach OD600 = 0.6-0.8, followed by adding xylose
(0.5% w/v) to the culture to induced the production of the
recombinant peptides by the strain. Cells were harvested by
centrifugation at 8,000 x g at 4 °C, and cell debris was resuspended in 20 mM Imidazole (20 mM Phosphate buffer,
0.3 M NaCl, 20 mM Imidazole, pH 7.5) and disrupted by
repetitive ultrasonication (Labsonic M Cell disrupter,
Sartorius, Germany) at 20 kHz for 15 s, interval 5 s and for 5
min with anti-protease PMSF was added to the culture. The
supernatant (crude protein preparation) was subjected to
further purification by employing HisTrap FF column (GE,
USA) according to the manufacturer’s protocol, and the final
elution harboring the His-tag recombinant peptide was
released by using 500 mM imidazole (20mM phosphate
buffer, 0.3 M NaCl, 500 mM imidazole, pH 7.5) and 900
mM imidazole (20mM phosphate buffer, 0.3M NaCl, 900
mM imidazole, pH 7.5). The purity of recombinant peptides
was assessed by SDS-polyacrylamide gel electrophoresis
(SDS-PAGE) on a 15% acrylamide gel. The protein
concentration was measured spectrophotometrically using
the Bicinchoninic Acid (BCA) Protein Assay kit (Pierce,
USA) using bovine serum albumin (BSA) as the standard.
For subsequent biochemical and bioassay studies, which the
latter was to establish whether the three peptides are the sole
agent responsible for the antimicrobial activity of W. confusa
MBF8-1, the recombinant peptides were produced in a large
scale. The purity of peptides designated r-Bac1, r-Bac2 and
r-Bac3 was confirmed by SDS-PAGE as a single band, but
some bands with unexpected molecular weight were
observed (Fig. 3). This result might be explained due to the
misfolding of recombinant peptides with 7×His-tag when
forming aggregate, or the hydrophobic/cationic feature of the
peptides23-24. However, some pure peptides can be obtained
by the method used.
Functional assays were carried out including standard
dilution method and MTT assay for minimum inhibitory
concentration (MIC) determination, and disc diffusion assay.
Principle Author et al.
The desalted 900 mM fraction of r-Bac1, r-Bac2 and r-Bac3
were tested against Leuconostoc mesenteroides TISTR 120.
Each r-Bac was prepared by two folds serial dilution in the
growth medium to make six point concentrations. Bacteria
were added 1×105 CFU/tube and the tubes were then
incubated at 32 °C in aerobic condition for 24 hours.
Standard MIC assay was employed to determine r-Bacs
activity, r-Bac 1 and r-Bac2 could inhibit the growth of
indicator bacteria but not r-Bac3 (Fig. 4A). All r-Bacs could
inhibit growth of L. mesenteroides cells, but had very weak
activity. Judging from the turbidity by MIC, we categorized
three types, i.e., well observed, slightly observed and none.
MTT assay, a colorimetric assay for measuring the activity
of enzymes that reduce 3-(4,5-dimethylthiazol-2-yl)-2,3diphenyltetrazolium bromidefor, has been widely used as an
additional method to confirm the activity of antibacterial
compounds 25. Each r-Bacs was prepared in serial dilution, in
the growth medium before addition of L. mesenteroides
TISTR 120 5×104 CFU/well and were grown overnight at
35±2 °C. Subsequently, 10 μL of 5 mg/mL MTT reagent was
added into each well and color change was observed after 3
hours incubation at 37 °C. With this method, all the r-Bacs
component could actively inhibit L. meseteroides (Fig. 4B).
Agar diffusion assay by using paper disc was done as
described 17 with Micrococcus luteus T18 as indicator
bacteria, diluted to 1×107 CFU/mL. Nisin was used as
positive control and BLIS fractions were also prepared as
comparison. As a single component, r-Bacs did not show
activity against M. luteus; however, combination of r-Bac1
and 2 as well as r-Bac 1 and 3 showed small inhibition.
Combination of the three bacteriocins altogether could
distinctly inhibit test bacteria (Fig. 5). Taken together (Table
2), these results aligned with our previous report of synthetic
bacteriocin tested against L. mesenteroides 17. Interestingly,
while the recombinant peptide showed activity, the BLIS
fractions which also were tested did not show any effect
against M. luteus.
Based on their DNA sequences characterization, bacteriocin
of gram-positive W. confusa MBF8-1 was proposed as
bacteriocin class IIb 3. The bacteriocin class IIb consists of 2
or more peptides that synergistically act to inhibit other
bacterial growth. To analyze the characteristic, each
bacteriocin peptide was studied as single component and in
combination with other peptides. To achieve this goal, a
construction of recombinant peptide was attempted by
employing GatewayR system based on high-efficient
recombinatorial technique compared to conventional method
using restriction endonuclease and ligase 26. This is the first
study reported on the construction of recombinant
bacteriocins of W. confusa MBF8-1.
The well diffusion agar method has been carried out to test
whether the peptides possessed growth inhibition activity on
agar plates observed as a clear zone. The recombinant
peptides exhibited very limited a clear zone against M. luteus
but previously reported the synthetic peptides showed a
better clear zone 17, in line with the results, which exhibited
only by s-Bac in combination mixture, i.e. s-Bac1+2, sBac1+3 and s-Bac1+2+3; the strongest inhibitory activity
was shown by s-Bac1+2+3. BLIS supernatant from W.
confusa MBF8-1 as the bioactive reference, comprise of
fractions <3 kDa, >3 kDa, <10 kDa and >10 kDa, showed
Title of the Article
that fraction <3 kDa is the strongest inhibitory activity as
indicated by the largest clear zone on agar plates 17.
Although it was weak, the recombinant peptides showed
antimicrobial activity that inhibits the growth of the grampositive L. mesenteroides. It can be assumed that the weak
activity results from the bacteriostatic nature of bacteriocin
itself other than the possibility of aggregation of small
peptides. This result suggests that the design of recombinant
peptides could affect the peptide folding 27. The poly His-tag
might interfere the folding process 28. The recombinant
bacteriocin obstructs bacterial growth, but does not kill
bacteria. Moreover, Bac peptides are expected as type IIb of
bacteriocin, which cannot work as antimicrobial agents as a
single component but must be in a combination with other
two Bac peptides 15. This could serve the fact with
speculation that the antimicrobial activity cannot be
preserved as a single Bac peptide only.
The AMP structure, which is simple poly-amino acids, is
relatively easy to modify (including library construction and
screening) and as well as to immobilize on surfaces 29. Since
it is small, AMP can be chemically made as synthetic
peptides 30. Several studies employed recombinant
expression systems to produce AMP 31-32. Therefore, it is
useful to modify existing AMPs for designing new synthetic
peptides. Such modifications have potential to change the
targets of AMPs and improve the stability of AMPs against
proteases 33.
The construction of the recombinant bacteriocin peptides
from W. confusa MBF8-1 for the development of AMP to be
combined with existing antibiotics might be a good strategy
to combat the “superbugs”. Further studies to construct and
modify such AMP molecules are necessary in the future.
Nevertheless, even though the cost of chemical synthesis for
AMP is not inexpensive, it can be highly guaranteed as a
pure form, and therefore could be potential to develop
rapidly as compare to the recombinant one.
LIST OF ABBREVIATIONS
aa – amino acid, AMP – antimicrobial peptide, AMR –
antimicrobial resistance, BCA - bicinchoninic acid, BSA –
bovine serum albumin, dNTP - deoxyribonucleotide
triphosphate, LAB – lactic acid bacteria, MW – molecular
weight, PCR – polymerase chain reaction, r-Bac –
recombinant bacteriocin, s-Bac – synthetic bacteriocin
CONSENT FOR PUBLICATION
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detail, audio-video material etc., consent should be obtained
from that individual. In case of children, consent should be
obtained from the parent or the legal guardian.
A specific declaration of such approval must be made in the
copyright letter and in a stand-alone paragraph at the end of
the Methods section especially in the case of human studies
where inclusion of a statement regarding obtaining the
written informed consent from each subject or subject's
guardian is a must. The original should be retained by the
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provide the original forms by fax or email.
All such case reports should be followed by a proper consent
prior to publishing.
Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0 5
CONFLICT OF INTEREST
The authors declare no existing conflict of interest. This
work was supported by the World Academy of Sciences
(TWAS), Italy, basic science research grant [14–094
RG/BIO/AS G-UNESCO FR: 324028606] (2015) to AM
and partly by Global Collaborative Program (2016-2017),
Nara Institute of Science and Technology, Nara, Japan, to
HT. E.Y. is currently a PhD student of Shanghai Institute of
Materia Medica, University of Chinese Academy of Sciences
under the CAS-TWAS Presedential Fellowship Program.
ACKNOWLEDGEMENTS
We greatly appreciate valuable scientific discussions with Dr.
Nick C.K. Heng, Sir John Walsh Research Institute,
University of Otago, Dunedin, New Zealand. We also thank
Dr. Shu Ishikawa, Kobe University, Nara Institute of Science
and Technology, Nara, Japan, for his generous support in the
manipulation of B. subtillis DB403.
FUNDING
This work was supported partly by the World Academy of
Sciences (TWAS), Italy, basic science research grant [14–
094 RG/BIO/AS G-UNESCO FR: 324028606] (2015) to
AM and partly by Global Collaborative Program (20162017), Nara Institute of Science and Technology, Nara,
Japan, to HT, and Hibah Penelitian Dasar Unggulan
Perguruan Tinggi (PDUPT) 2018-2019 from the Ministry of
Research, Technology and Higher Education of the Republic
of Indonesia to A.M (No. 261/UN2.R3.1/HKP05.00/2018
and NKB-1469/UN2.R3.1/HKP.05.00/2019).
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Papo, N.; Oren, Z.; Pag, U.; Sahl, H. G.; Shai, Y.,
The consequence of sequence alteration of an amphipathic
alpha-helical antimicrobial peptide and its diastereomers. J.
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Table 1. Oligonucleotides used for cloning in this study
Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0 7
Title of the Article
No.
Name
Sequence
1
SD-start-attB1
5'- GGG GAC AAG TTT GTA CAA AAA AGC AGG CTC GAA GGG AGG TGT CAT AAA For recombinatorial cloning
TG-3'
2
7his-attB2
5'- GGG GAC CAC TTT GTA CAA GAA AGC TGG GTC TCA TCT ATT TAA TGG TGG
TGG TGA TGG TGA TGC GAT CC-3'
For recombinatorial cloning
3
Bac8-1a_
Gw_Fw
5'- CGA AGG GAG GTG TCA TAA ATG GAT GAT AAG TTT AGT GC -3'
For recombinatorial cloning of bac1
4
Bac8-1a_
Gw_Rv
5'- GAT GGT GAT GGT GAT GCG ATC CAT GCT GTG GAC GGT AC-3'
For recombinatorial cloning of bac1
5
Bac8-1b_
Gw_Fw
1.
5’-CGA AGG GAG GTG TCA TAA ATG GAT AAA AAA TTA ATT TTA G -3’
For recombinatorial cloning of bac2
6
Bac8-1b_
Gw_Rv
2.
5’-GAT GGT GAT GGT GAT GCG ATC CCC CAA AGG CAC TGC AAA TCC -3’
For recombinatorial cloning of bac2
7
Bac8-1c_
Gw_Fw
5’- CGA AGG GAG GTG TCA TAA ATG AAT AAT AAT TTA AAG -3’
For recombinatorial cloning of bac3
8
Bac8-1c_
Gw_Rv
5’- GAT GGT GAT GGT GAT GCG ATC CAC GAACACGTCGCATAATTC-3’
For recombinatorial cloning of bac3
9
pDONR-F
5'-TCGCGTTAACGCTAGCATGGATCT C-3'
Specific primer for recombinatorial
cloning confirmation
10
pDONR-R
5'-GTAACATCAGAGATTTTGAGACAC-3'
Specific primer for recombinatorial
cloning confirmation
11
Bac8-1_aFw
5’-ATGGATGATAAGTTTAGTGCTTTAAG-3’
Internal primer for recombinant
strain confirmation carrying bac1
12
Bac8-1_aRv
5’-ATGCTGTGGACGGTACTTTG-3’
Internal primer for recombinant
strain confirmation carrying bac1
13
Bac8-1_bFw
5'-ATGGATAAAAAATTAATTTTAGATAAG-3’
Internal primer for recombinant
strain confirmation carrying bac2
14
Bac8-1_bRv
5’-CCCAAAGGCACTTGCAAATC-3’
Internal primer for recombinant
strain confirmation carrying bac2
15
Bac8-1_cFw
16
Bac8-1_cRv
5’-ATGAATAATAATTTAAAGATATTAAATG-3’
5’-ACGAACACGTCGCATAATTC-3’
Description
Internal primer for recombinant
strain confirmation carrying bac3
Internal primer for recombinant
strain confirmation carrying bac3
Table 2. Antibacterial assay performing MIC and inhibition zones of crude and r-Bacs
Peptides
MIC by MTT assay (µg/mL)
(L. mesenteroides TISTR120)
Disc diffusion assay (diameter in mm)
(M. luteus T18)
8 Current Pharmaceutical Biotechnology, 2019, Vol. 0, No. 0
Principle Author et al.
Nisin
ND
22.13
BLIS ˃30 kDa
ND
NA
BLIS ˂30 kDa
ND
NA
BLIS ˃10 kDa
ND
NA
BLIS ˂10 kDa
ND
NA
r-Bac1
10,416.7
NA
r-Bac2
12,500
NA
r-Bac3
12,500
NA
r-Bac1,2
ND
8
r-Bac1,3
ND
7.9
r-Bac2,3
ND
NA
r-Bac1,2,3
ND
9.15
NA: not active; ND: not determined
FIGURE LEGENDS
Fig. 1. Construction of the recombinant three putative bacteriocin genes in B. subtilis. pWcMBF8-1, plasmid harboring the
genes encoding bacteriocins from W. confusa MBF8-1; bac, bacteriocin encoding gene; attB1 and attB2, GatewayR
recombinatorial sites; SD, a Shine-Dalgarno sequence; 7his, 7×histidine tag; pDONR221, the entry vector; pOXGW, the
expression vector; r-Bac1/2/3, recombinant bacteriocin 1/2/3/.
Fig. 2. Confirmation of B. subtilis DB403 transformants. Genomic PCR was done using internal primer pairs with plasmid
extracted from B. subtilis DB403 transformants. Amplicons with primer pairs for: bac1 (expected size 186 bp), bac2 (expected
size 153 bp), and bac3 (expected size 158 bp) from cells harboring pMBF8-1bac1, pMBF8-1bac2, and pMBF8-1bac3,
respectively. DNA marker used was 100 bp DNA ladder (HyperLadder™, Bioline, London, UK). PCR products were loaded
duplicate on 2% agarose gel with 1×TAE buffer.
Fig. 3. Purification of recombinant bacteriocins. Recombinant bacteriocins r-Bac1, r-Bac2, and r-Bac3 were obtained as
mostly pure peptides after purification step with final elution using 500 mM Imidazole.
Fig. 4. Bioactivity of r-Bacs against Leuconostoc mesenteroides. MIC by MTT assay results of r-Bacs. WT: wild type B.
subtilis DB403; Blank: growth medium only; Positive control: 50 µg/mL ampicillin in growth medium with bacteria; Negative
control: growth medium with bacteria; each done in triplicate.
Fig. 5. Bioactivity of r-Bacs against Micrococcus luteus. Single and combined r-Bacs were tested with nisin as control. As
comparison, fractions of MBF8-1 BLIS were also tested.
Fig. 1
Fig. 2
Fig. 3
Fig. 4
A.
L. mesenteroides
B.
-
+
+
+
+
+
+
+
[Conc.] (µg/mL)
100,000
50,000
[r-Bac1] (µg/mL) -
150
75 37.5 18.8
9.4
4.7
-
25,000
12,500
6,250
[r-Bac2] (µg/mL) -
175 87.5 43.8 21.9 10.9 5.7
-
[r-Bac3] (µg/mL) -
150
-
75 37.5 18.8
9.4
4.7
3,125
Blank
KM
KK
Fig. 5