Excitable Media

We present a class of reversible cellular automata which display soliton-mediated phase transitions and chemical turbulence. This class is defined as the reversible extension of simple reaction-diffusion models of excitable media such as the Schlögl and Greenberg-Hastings models. The phenomenology of these models is discussed in terms of dimensionality, neighborhood and number of states. Reversibility imposes constraints and introduces conservation laws that give rise to invariant quantities.

The motion of organization center of three-dimensional untwisted scroll waves in excitable media with single diffusion is studied by singular perturbation method in this paper. The relation of curvature and the linear law are derived for untwisted organization center. These results have explicit physical meaning and are in good agreement with experiments

We construct a model of an excitable medium with elastic rather than the usual diffusive coupling. We explore the dynamics of elastic excitable media, which we find to be dominated by low dimensional structures, including global oscillations, period-doubled pacemakers, and propagating fronts. We suggest that examples of elastic excitable media are to be found in such diverse physical systems as Burridge-Knopoff models of frictional sliding, electronic transmission lines, and active optical waveguides.

It is traditionally assumed that impulse propagation in cardiac muscle is determined by the combination of two factors: (1) the active properties of cardiac cell membranes and (2) the passive electrical characteristics of the network formed by cardiac cells. However, advances made recently in the theory of generic excitable media suggest that an additional factor-the geometry of excitation wavefronts -may play an important role. In particular, impulse propagation strongly depends on the wavefront curvature on a small spatial scale. In the heart, excitation wavefronts have pronounced curvatures in several situations including waves initiated by small electrodes, waves emerging from narrow tissue structures, and waves propagating around the sharp edges of anatomical obstacles or around a zone of functional conduction block during spiral wave rotation. In this short review we consider the theoretical background relating impulse propagation to wavefront curvature and we estimate the role of wavefront curvature in electrical stimulation, formation of conduction block, and the dynamic behavior of spiral waves.

We study the stochastic dynamics of strongly-coupled excitable elements on a tree network. The peripheral nodes receive independent random inputs which may induce large spiking events propagating through the branches of the tree and leading to global coherent oscillations in the network. This scenario may be relevant to action potential generation in certain sensory neurons, which possess myelinated distal dendritic tree-like arbors with excitable nodes of Ranvier at peripheral and branching nodes and exhibit noisy periodic sequences of action potentials. We focus on the spiking statistics of the central node, which fires in response to a noisy input at peripheral nodes. We show that, in the strong coupling regime, relevant to myeli-nated dendritic trees, the spike train statistics can be predicted from an isolated excitable element with rescaled parameters according to the network topology. Furthermore, we show that by varying the network topology the spike train statistics of the central node can be tuned to have a certain firing rate and variability, or to allow for an optimal discrimination of inputs applied at the peripheral nodes.

Rotating spiral and scroll waves (vortices) are investigated in the FitzHugh-Nagumo model of excitable media. The focus is on a parameter region in which there exists bistability between alternative stable vortices with distinct periods. Response Functions are used to predict the filament tension of the alternative scrolls and it is shown that the slow-period scroll has negative filament tension, while the filament tension of the fast-period scroll changes sign within a hysteresis loop. The predictions are confirmed by direct simulations. Further investigations show that the slow-period scrolls display features similar to delayed after-depolarisation (DAD) and tend to develop into turbulence similar to Ventricular Fibrillation (VF). Scrolls with positive filament tension collapse or stabilize, similar to monomorphic Ventricular Tachycardia (VT). Perturbations, such as boundary interaction or shock stimulus, can convert the vortex with negative filament tension into the vortex with positive filament tension. This may correspond to transition from VF to VT unrelated to pinning.

Life-threatening cardiac arrhythmias are associated with the existence of stable and unstable spiral waves. Termination of such complex spatio-temporal patterns by local control is substantially limited by anchoring of spiral waves at natural heterogeneities. Far-field pacing (FFP) is a new local control strategy that has been shown to be capable of unpinning waves from obstacles. In this article, we investigate in detail the FFP unpinning mechanism for a single rotating wave pinned to a heterogeneity. We identify qualitatively different phase regimes of the rotating wave showing that the concept of vulnerability is important but not sufficient to explain the failure of unpinning in all cases. Specifically, we find that a reduced excitation threshold can lead to the failure of unpinning, even inside the vulnerable window. The critical value of the excitation threshold (below which no unpinning is possible) decreases for higher electric field strengths and larger obstacles. In contrast, for a high excitation threshold, the success of unpinning is determined solely by vulnerability, allowing for a convenient estimation of the unpinning success rate. In some cases, we also observe phase resetting in discontinuous phase intervals of the spiral wave. This effect is important for the application of multiple stimuli in experiments.

Reactive lattice gas automata provide a microscopic approachto the dynamics of spatially-distributed reacting systems. After introducing the subject within the wider framework of lattice gas automata (LGA) as a microscopic approach to the phenomenology of macroscopic systems, we describe the reactive LGA in terms of a simple physical picture to show how an automaton can be constructed to capture the essentials of a reactive molecular dynamics scheme. The statistical mechanical theory of the automaton is then developed for diffusive transport and for reactive processes, and a general algorithm is presented for reactive LGA. The method is illustrated by considering applications to bistable and excitable media, oscillatory behavior in reactive systems, chemical chaos and pattern formation triggered by Turing bifurcations. The reactive lattice gas scheme is contrasted with related cellular automaton methods and the paper concludes with a discussion of future perspectives.

The Burridge-Knopoff model of earthquake faults with viscous friction is equivalent to a van der Pol-FitzHugh-Nagumo model for excitable media with elastic coupling. The lubricated creep-slip friction law we use in the Burridge-Knopoff model describes the frictional sliding dynamics of a range of real materials. Low-dimensional structures including synchronized oscillations and propagating fronts are dominant, in agreement with the results of laboratory friction experiments. Here we explore the dynamics of fronts in elastic excitable media.

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In August 2000 the Ateneo de Manila University High Performance Computing Group built a Beowulf cluster intended for computational science applications. The first computational project conducted by the group was the use of cellular automata in modeling wave propagation in excitable media using the Beowulf cluster.

Considers reaction-diffusion systems in excitable media for studying the dynamics of related travelling waves. In particular, the one-dimensional Fitzhugh-Nagumo model is considered to apply two classical approaches of feedback systems and derive results of structural kind. The comparison with simulations obtained by a new integration procedure indicates the possible usefulness of such methods in this specific context

We investigate the impact of the domain shape on wave propagation in excitable media. Channelled domains with sinusoidal boundaries are considered. Trains of fronts generated periodically at an extreme of the channel are found to adopt a quasiperiodic spatial configuration stroboscopically frozen in time. The phenomenon is studied in a model for the photo-sensitive Belousov-Zabotinsky reaction, but we give a theoretical derivation of the spatial return maps prescribing the height and position of the successive fronts that is valid for arbitrary excitable reaction-diffusion systems.

If an excitable medium is moving with relative shear, the waves of excitation may be broken by the motion. We consider such breaks for the case of a constant linear shear flow. The mechanisms and conditions for the breaking of solitary waves and wavetrains are essentially different: the solitary waves require the velocity gradient to exceed a certain threshold, whilst the breaking of repetitive wavetrains happens for arbitrarily small velocity gradients. Since broken waves evolve into new spiral wave sources, this leads to spatio-temporal irregularity.