Temporary Disabled. :) please Go back RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP - Wikidata www.fgks.org » Address: [go: up one dir, main page] Include Form Remove Scripts Accept Cookies Show Images Show Referer Rotate13 Base64 Strip Meta Strip Title Session Cookies RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP (Q33826941) From Wikidata Jump to navigation Jump to search scientific article edit Language Label Description Also known as English RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP scientific article Statements instance of scholarly article 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 title RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP (English) 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 author name string Daniel L Baker series ordinal 1 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 Osama A Youssef series ordinal 2 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 Michael I R Chastkofsky series ordinal 3 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 David A Dy series ordinal 4 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 Rebecca M Terns series ordinal 5 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 Michael P Terns series ordinal 6 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 publication date 3 May 2005 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 published in Genes & Development 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 volume 19 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 issue 10 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 page(s) 1238-1248 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 cites work Modified nucleotides at the 5' end of human U2 snRNA are required for spliceosomal E-complex formation 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs. 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The functions 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structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Structure and function of archaeal box C/D sRNP core proteins 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 RNA-guided nucleotide modification of ribosomal and other RNAs 1 reference stated in PubMed Central reference URL 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pseudouridylation guide RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Small Nucleolar RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin. 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The kink-turn: a new RNA secondary structure motif 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 THUMP--a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Internal modification of U2 small nuclear (sn)RNA occurs in nucleoli of Xenopus oocytes 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Pseudouridine in RNA: what, where, how, and why 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Evolutionary appearance of genes encoding proteins associated with box H/ACA snoRNAs: cbf5p in Euglena gracilis, an early diverging eukaryote, and candidate Gar1p and Nop10p homologs in archaebacteria 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Homologs of small nucleolar RNAs in Archaea 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Point mutations in yeast CBF5 can abolish in vivo pseudouridylation of rRNA 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Role of the box C/D motif in localization of small nucleolar RNAs to coiled bodies and nucleoli 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure. 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 A small nucleolar RNP protein is required for pseudouridylation of eukaryotic ribosomal RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 An essential yeast protein, CBF5p, binds in vitro to centromeres and microtubules 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 NAP57, a mammalian nucleolar protein with a putative homolog in yeast and bacteria 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The numerous modified nucleotides in eukaryotic ribosomal RNA 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 4 July 2018 The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity. 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 29 October 2018 Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 29 October 2018 Archaeal guide RNAs function in rRNA modification in the eukaryotic nucleus. 1 reference stated in PubMed Central reference URL https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1132009 retrieved 29 October 2018 Identifiers DOI 10.1101/GAD.1309605 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 PMC publication ID 1132009 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 PubMed publication ID 15870259 1 reference stated in Europe PubMed Central PubMed publication ID 15870259 retrieved 29 July 2017 ResearchGate publication ID 7868660 0 references Sitelinks Wikipedia(0 entries) edit Wikibooks(0 entries) edit Wikinews(0 entries) edit Wikiquote(0 entries) edit Wikisource(0 entries) edit Wikiversity(0 entries) edit Wikivoyage(0 entries) edit Wiktionary(0 entries) edit Multilingual sites(0 entries) edit Navigation menu Personal tools EnglishNot logged inTalkContributionsCreate accountLog in Namespaces ItemDiscussion English Views ReadView history More Search Navigation Main pageCommunity portalProject chatCreate a new ItemRecent changesRandom ItemQuery ServiceNearbyHelpDonate Lexicographical data Create a new LexemeRecent changesRandom Lexeme Tools What links hereRelated changesSpecial pagesPermanent linkPage informationConcept URICite this pageGet 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