Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks (Q41779480)

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scientific article published on 14 October 2013

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English	Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks	scientific article published on 14 October 2013

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instance of

scholarly article

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

title

Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks (English)

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

main subject

metabolic network

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based on heuristic

inferred from title

author

Fabrizio Capuani

series ordinal

2

object named as

Fabrizio Capuani

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Daniele De Martino

series ordinal

1

object named as

Daniele De Martino

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Andrea De Martino

object named as

Andrea De Martino

series ordinal

4

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author name string

Matteo Mori

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

Enzo Marinari

series ordinal

5

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

publication date

14 October 2013

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

published in

Metabolites

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

volume

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

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9 October 2017

issue

4

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

page(s)

946-966

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stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

copyright license

Creative Commons Attribution 4.0 International

start time

14 October 2013

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April 2022 Public Data File from Crossref

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copyrighted

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cites work

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What is flux balance analysis?

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Quantitative assignment of reaction directionality in constraint-based models of metabolism: application to Escherichia coli

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Intracellular crowding defines the mode and sequence of substrate uptake by Escherichia coli and constrains its metabolic activity.

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A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

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Including metabolite concentrations into flux balance analysis: thermodynamic realizability as a constraint on flux distributions in metabolic networks

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Thermodynamics-based metabolic flux analysis

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Systematic assignment of thermodynamic constraints in metabolic network models

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Uniform sampling of steady-state flux spaces: means to design experiments and to interpret enzymopathies.

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The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

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Analysis of optimality in natural and perturbed metabolic networks

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Energy balance for analysis of complex metabolic networks

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Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective

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Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space

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Network-based prediction of human tissue-specific metabolism

1 reference

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reference URL

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12 December 2020

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inferred from PubMed ID database lookup

Identifiers

DOI

10.3390/METABO3040946

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

arXiv ID

1310.3693

0 references

PMC publication ID

3937828

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

PubMed publication ID

24958259

1 reference

stated in

Europe PubMed Central

PMC publication ID

3937828

retrieved

9 October 2017

ResearchGate publication ID

257749334

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