txid2[Organism:exp] AND (complex_dna[filt]) - Structure - NCBI

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Select item 1874701.

Molecular Structure Image for 6PMJ

Sigm28-transcription initiation complex with specific promoter at the state 2[TRANSCRIPTION]

Taxonomy:: Escherichia coli O157:H7, Escherichia coli S88, Escherichia coli K-12, Escherichia coli

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-03-25

MMDB ID:: 187470
PDB ID:: 6PMJ

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Select item 1874692.

Molecular Structure Image for 6PMI

Sigm28-transcription initiation complex with specific promoter at the state 1[TRANSCRIPTION]

Taxonomy:: Escherichia coli O157:H7, Escherichia coli S88, Escherichia coli K-12, Escherichia coli

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-03-25

MMDB ID:: 187469
PDB ID:: 6PMI

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Select item 1561333.

Molecular Structure Image for 6B6H

The cryo-EM structure of a bacterial class I transcription activation complex[TRANSCRIPTION/TRANSFERASE/DNA/RNA]

Taxonomy:: Escherichia coli O157:H7, Escherichia coli S88, Escherichia coli K-12, Escherichia coli

Proteins:: 9
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 5
modified:: 2024-03-21

MMDB ID:: 156133
PDB ID:: 6B6H

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Select item 2252404.

Molecular Structure Image for 8CXT

CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor N6-benzyladenosine (Compound 1)[DNA BINDING PROTEIN/DNA]

Taxonomy:: Clostridioides difficile 630, Clostridioides difficile, Clostridioides difficile 5.3

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 3
modified:: 2023-10-31

MMDB ID:: 225240
PDB ID:: 8CXT

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Select item 2218445.

Molecular Structure Image for 8AC0

RNA polymerase at U-rich pause bound to regulatory RNA putL - active, closed clamp state[TRANSCRIPTION]

Taxonomy:: Escherichia coli BL21, Escherichia coli K-12, Escherichia coli

Proteins:: 5
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2022-11-02

MMDB ID:: 221844
PDB ID:: 8AC0

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Select item 1946956.

Molecular Structure Image for 6WVJ

Cryo-EM structure of Bacillus subtilis RNA Polymerase elongation complex[TRANSCRIPTION/DNA/RNA]

Taxonomy:: Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis, Escherichia coli BL21(DE3)

Proteins:: 5
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-06-04

MMDB ID:: 194695
PDB ID:: 6WVJ

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Select item 1940967.

Molecular Structure Image for 6M6B

Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase and ATP-gamma-S[TRANSCRIPTION]

Taxonomy:: Thermus thermophilus HB8, Thermus thermophilus HB27, Thermus thermophilus

Proteins:: 6
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2024-04-01

MMDB ID:: 194096
PDB ID:: 6M6B

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Select item 1940958.

Molecular Structure Image for 6M6A

Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase[TRANSCRIPTION]

Taxonomy:: Thermus thermophilus HB8, Thermus thermophilus HB27, Thermus thermophilus

Proteins:: 6
Nucleic acids:: (DNA)
Chemicals:: 3
modified:: 2024-04-01

MMDB ID:: 194095
PDB ID:: 6M6A

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Select item 1846009.

Molecular Structure Image for 6OUL

Cryo-EM structure of Escherichia coli RNAP polymerase bound to rpsTP2 promoter DNA[TRANSCRIPTION]

Taxonomy:: Escherichia coli, Escherichia coli 110957, Escherichia coli K-12

Proteins:: 7
Nucleic acids:: (DNA)
Chemicals:: 6
modified:: 2024-03-25

MMDB ID:: 184600
PDB ID:: 6OUL

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Select item 18152610.

Molecular Structure Image for 6PPU

Cryo-EM structure of AdnAB-AMPPNP-DNA complex[DNA BINDING PROTEIN/DNA]

Taxonomy:: Mycolicibacterium smegmatis MC2 155, Mycolicibacterium smegmatis, Bacillus subtilis subsp. subtilis str. 168

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2024-03-25

MMDB ID:: 181526
PDB ID:: 6PPU

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Select item 17776411.

Molecular Structure Image for 6OVR

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -1G[TRANSCRIPTION/DNA/RNA]

Taxonomy:: Thermus thermophilus HB8, Bacillus subtilis, Thermus thermophilus

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 5
modified:: 2023-10-16

MMDB ID:: 177764
PDB ID:: 6OVR

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Select item 17745412.

Molecular Structure Image for 6J9F

Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with the bacteriophage protein P7[TRANSCRIPTION]

Taxonomy:: Xanthomonas oryzae pv. oryzae PXO99A, Xanthomonas oryzae pv. oryzae MAFF 311018, Xanthomonas oryzae pv. oryzae, synthetic construct, Xipdecavirus Xp10

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 3
modified:: 2024-04-01

MMDB ID:: 177454
PDB ID:: 6J9F

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Select item 15254113.

Molecular Structure Image for 5X22

Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP[TRANSFERASE/DNA]

Taxonomy:: Thermus thermophilus, Thermus thermophilus HB8, Thermus thermophilus HB27

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2023-12-04

MMDB ID:: 152541
PDB ID:: 5X22

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Select item 15254014.

Molecular Structure Image for 5X21

Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)[TRANSFERASE/DNA]

Taxonomy:: Thermus thermophilus, Thermus thermophilus HB8, Thermus thermophilus HB27

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2022-10-12

MMDB ID:: 152540
PDB ID:: 5X21

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Select item 15117915.

Molecular Structure Image for 5VOI

X-ray crystal structure of bacterial RNA polymerase and pyrG promoter complex[transcription/dna/rna]

Taxonomy:: Thermus thermophilus HB27, Thermus thermophilus HB8, Bacillus subtilis

Proteins:: 6
Nucleic acids:: (DNA)
Chemicals:: 5
modified:: 2023-10-10

MMDB ID:: 151179
PDB ID:: 5VOI

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Select item 15117716.

Molecular Structure Image for 5VO8

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter[transcription/DNA/RNA]

Taxonomy:: Thermus thermophilus HB8, Bacillus subtilis, Thermus thermophilus

Proteins:: 6
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 5
modified:: 2023-10-10

MMDB ID:: 151177
PDB ID:: 5VO8

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Select item 14087317.

Molecular Structure Image for 5D4E

Crystal structure of Thermus thermophilus product complex for transcription initiation with 3'-dephosphate-CoA and CTP[transcription/dna]

Taxonomy:: Thermus thermophilus, Thermus thermophilus HB8, Thermus thermophilus HB27

Proteins:: 6
Nucleic acids:: (DNA)
Chemicals:: 10
modified:: 2023-10-03

MMDB ID:: 140873
PDB ID:: 5D4E

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Select item 14087218.

Molecular Structure Image for 5D4D

Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD and CTP[transcription/dna]

Taxonomy:: Thermus thermophilus, Thermus thermophilus HB8, Thermus thermophilus HB27

Proteins:: 6
Nucleic acids:: (DNA)
Chemicals:: 10
modified:: 2024-06-04

MMDB ID:: 140872
PDB ID:: 5D4D

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Select item 24798619.

Molecular Structure Image for 8YGJ

SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)[RNA BINDING PROTEIN/DNA/RNA]

Taxonomy:: Streptococcus pyogenes, Moloney murine leukemia virus, Streptococcus pyogenes serotype M1

Proteins:: 2
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-06-17

MMDB ID:: 247986
PDB ID:: 8YGJ

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Select item 24798520.

Molecular Structure Image for 8Y6U

Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA[TRANSCRIPTION/DNA]

Taxonomy:: Escherichia coli K-12, Escherichia coli

Proteins:: 9
Nucleic acids:: (DNA)
modified:: 2024-06-05

MMDB ID:: 247985
PDB ID:: 8Y6U

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