[HTML][HTML] The mammalian epigenome

BE Bernstein, A Meissner, ES Lander - Cell, 2007 - cell.com
Chemical modifications to DNA and histone proteins form a complex regulatory network that
modulates chromatin structure and genome function. The epigenome refers to the complete …

[HTML][HTML] Lessons from the cancer genome

LA Garraway, ES Lander - Cell, 2013 - cell.com
Systematic studies of the cancer genome have exploded in recent years. These studies
have revealed scores of new cancer genes, including many in processes not previously …

On the allelic spectrum of human disease

DE Reich, ES Lander - TRENDS in Genetics, 2001 - cell.com
Human disease genes show enormous variation in their allelic spectra; that is, in the number
and population frequency of the disease-predisposing alleles at the loci. For some genes …

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

M Guttman, I Amit, M Garber, C French, MF Lin… - Nature, 2009 - nature.com
There is growing recognition that mammalian cells produce many thousands of large
intergenic transcripts,,,. However, the functional significance of these transcripts has been …

Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.

ES Lander, D Botstein - Genetics, 1989 - academic.oup.com
The advent of complete genetic linkage maps consisting of codominant DNA markers
[typically restriction fragment length polymorphisms (RFLPs)] has stimulated interest in the …

[HTML][HTML] A bivalent chromatin structure marks key developmental genes in embryonic stem cells

BE Bernstein, TS Mikkelsen, X Xie, M Kamal… - Cell, 2006 - cell.com
The most highly conserved noncoding elements (HCNEs) in mammalian genomes cluster
within regions enriched for genes encoding developmentally important transcription factors …

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

AM Khalil, M Guttman, M Huarte… - Proceedings of the …, 2009 - National Acad Sciences
We recently showed that the mammalian genome encodes> 1,000 large intergenic
noncoding (linc) RNAs that are clearly conserved across mammals and, thus, functional …

lincRNAs act in the circuitry controlling pluripotency and differentiation

M Guttman, J Donaghey, BW Carey, M Garber… - Nature, 2011 - nature.com
Although thousands of large intergenic non-coding RNAs (lincRNAs) have been identified in
mammals, few have been functionally characterized, leading to debate about their biological …

Reactive oxygen species have a causal role in multiple forms of insulin resistance

N Houstis, ED Rosen, ES Lander - Nature, 2006 - nature.com
Insulin resistance is a cardinal feature of type 2 diabetes and is characteristic of a wide
range of other clinical and experimental settings. Little is known about why insulin resistance …

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

E Lieberman-Aiden, NL Van Berkum, L Williams… - science, 2009 - science.org
We describe Hi-C, a method that probes the three-dimensional architecture of whole
genomes by coupling proximity-based ligation with massively parallel sequencing. We …