Title | Authors (identified) | Published In | Identifier(s) | Topic | Published Date | Match? |
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Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0 | [1]Brian R Granger, [2]Yi-Chien Chang, [3]Yan Wang, [4]Charles DeLisi, [5]Daniel Segrè, [6]Zhenjun Hu [Full author list] | PLOS Computational Biology [missing] | DOI: 10.1371/JOURNAL.PCBI.1004875 [ORCID] PubMed: 27081850 [ORCID]
| visualization [missing] | 2016-04-01 | |
COMBREX-DB: an experiment centered database of protein function: knowledge, predictions and knowledge gaps. | [1]Yi-Chien Chang, [2]Zhenjun Hu, [3]John Rachlin, [4]Brian P Anton, [5]Simon Kasif, [6]Richard Roberts, [7]Martin Steffen [Full author list] | Nucleic Acids Research [missing] | DOI: 10.1093/NAR/GKV1324 [ORCID] PubMed: 26635392 [ORCID]
| knowledge gap hypothesis [missing]; protein function prediction [missing]; knowledge gap [missing] | 2015-12-03 | |
The COMBREX project: design, methodology, and initial results | [1]Brian P Anton, [2]Yi-Chien Chang, [3]Peter Brown, [4]Han-Pil Choi, [5]Lina L Faller, [6]Jyotsna Guleria, [7]Zhenjun Hu, [8]Niels Klitgord, [9]Ami Levy-Moonshine, [10]Almaz Maksad, ... [Full author list] | PLOS Biology [missing] | DOI: 10.1371/JOURNAL.PBIO.1001638 [ORCID] PubMed: 24013487 [ORCID]
| | 2013-08-27 | |
VisANT 4.0: Integrative network platform to connect genes, drugs, diseases and therapies | [1]Zhenjun Hu, [2]Yi-Chien Chang, [3]Yan Wang, [4]Chia-Ling Huang, [5]Yang Liu, [6]Feng Tian, [7]Brian Granger, [8]Charles Delisi [Full author list] | Nucleic Acids Research [missing] | DOI: 10.1093/NAR/GKT401 [ORCID] PubMed: 23716640 [ORCID]
| | 2013-05-28 | |
Erratum: Corrigendum: The BioPAX community standard for pathway data sharing | [1]Emek Demir, [2]Michael P Cary, [3]Suzanne Paley, [4]Ken Fukuda, [5]Christian Lemer, [6]Imre Vastrik, [7]Guanming Wu, [8]Peter D'Eustachio, [9]Carl Schaefer, [10]Joanne Luciano, [11]Frank Schacherer, [12]Irma Martínez-Flores, [13]Zhenjun Hu, [14]Veronica Jimenez-Jacinto, [15]Geeta Joshi-Tope, ... [Full author list] | Nature Biotechnology [missing] | DOI: 10.1038/NBT0412-365C [ORCID]
| data sharing [missing]; The BioPAX community standard for pathway data sharing [missing] | 2012-04-01 | |
COMBREX: a project to accelerate the functional annotation of prokaryotic genomes | [1]Richard Roberts, [2]Yi-Chien Chang, [3]Zhenjun Hu, [4]John N Rachlin, [5]Brian P Anton, [6]Revonda M Pokrzywa, [7]Han-Pil Choi, [8]Lina L Faller, [9]Jyotsna Guleria, [10]Genevieve Housman, ... [Full author list] | Nucleic Acids Research [missing] | DOI: 10.1093/NAR/GKQ1168 [ORCID] PubMed: 21097892 [ORCID]
| | 2011-01-01 | |
Erratum: Corrigendum: The BioPAX community standard for pathway data sharing | [1]Emek Demir, [2]Michael P Cary, [3]Suzanne Paley, [4]Ken Fukuda, [5]Christian Lemer, [6]Imre Vastrik, [7]Guanming Wu, [8]Peter D'Eustachio, [9]Carl Schaefer, [10]Joanne Luciano, [11]Frank Schacherer, [12]Irma Martínez-Flores, [13]Zhenjun Hu, [14]Veronica Jimenez-Jacinto, [15]Geeta Joshi-Tope, ... [Full author list] | Nature Biotechnology [missing] | DOI: 10.1038/NBT1210-1308C [ORCID]
| data sharing [missing]; The BioPAX community standard for pathway data sharing [missing] | 2010-12-07 | |
The BioPAX community standard for pathway data sharing | [1]Emek Demir, [2]Michael P Cary, [3]Suzanne Paley, [4]Ken Fukuda, [5]Christian Lemer, [6]Imre Vastrik, [7]Guanming Wu, [8]Peter D'Eustachio, [9]Carl Schaefer, [10]Joanne Luciano, [11]Frank Schacherer, [12]Irma Martínez-Flores, [13]Zhenjun Hu, [14]Veronica Jimenez-Jacinto, [15]Geeta Joshi-Tope, ... [Full author list] | Nature Biotechnology [missing] | DOI: 10.1038/NBT.1666 [ORCID] PubMed: 20829833 [ORCID]
| biotechnology [missing]; microbiology [missing]; BioPAX [missing]; data sharing [missing] | 2010-09-01 | |
Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network | [1]Bolan Linghu, [2]Evan S Snitkin, [3]Zhenjun Hu, [4]Yu Xia, [5]Charles Delisi [Full author list] | Genome Biology [missing] | DOI: 10.1186/GB-2009-10-9-R91 [ORCID] PubMed: 19728866 [ORCID]
| genome-wide association study [missing]; prioritization [missing] | 2009-09-03 | |
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction | [1]Zhenjun Hu, [2]David M Ng, [3]Takuji Yamada, [4]Chunnuan Chen, [5]Shuichi Kawashima, [6]Joe Mellor, [7]Bolan Linghu, [8]Minoru Kanehisa, [9]Joshua M Stuart, [10]Charles DeLisi [Full author list] | Nucleic Acids Research [missing] | DOI: 10.1093/NAR/GKM295 [ORCID] PubMed: 17586824 [ORCID]
| visualization [missing] | 2007-06-22 | |
Towards zoomable multidimensional maps of the cell | [1]Zhenjun Hu, [2]Joe Mellor, [3]Jie Wu, [4]Minoru Kanehisa, [5]Joshua M Stuart, [6]Charles DeLisi [Full author list] | Nature Biotechnology [missing] | DOI: 10.1038/NBT1304 [ORCID] PubMed: 17483841 [ORCID]
| | 2007-05-01 | |
Gene annotation and network inference by phylogenetic profiling | [1]Jie Wu, [2]Zhenjun Hu, [3]Charles DeLisi [Full author list] | BMC Bioinformatics [missing] | DOI: 10.1186/1471-2105-7-80 [ORCID] PubMed: 16503966 [ORCID]
| phylogenetics [missing] | 2006-02-17 | |
VisANT: data-integrating visual framework for biological networks and modules | [1]Zhenjun Hu, [2]Joe Mellor, [3]Jie Wu, [4]Takuji Yamada, [5]Dustin Holloway, [6]Charles Delisi [Full author list] | Nucleic Acids Research [missing] | DOI: 10.1093/NAR/GKI431 [ORCID] PubMed: 15980487 [ORCID]
| | 2005-07-01 | |
Analyzing networks with VisANT. | [1]Zhenjun Hu, [2]Joseph Mellor, [3]Charles DeLisi [Full author list] | Current Protocols in Bioinformatics [missing] | DOI: 10.1002/0471250953.BI0808S08 [ORCID] PubMed: 18428738 [ORCID]
| | 2004-12-01 | |
VisANT: an online visualization and analysis tool for biological interaction data | [1]Zhenjun Hu, [2]Joseph Mellor, [3]Jie Wu, [4]Charles DeLisi [Full author list] | BMC Bioinformatics [missing] | DOI: 10.1186/1471-2105-5-17 [ORCID] PubMed: 15028117 [ORCID]
| visualization [missing] | 2004-02-19 | |