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Taxonomy browser (Takifugu rubripes)

Takifugu rubripes

Taxonomy ID: 31033
Genbank common name: torafugu
Inherited blast name: bony fishes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
genbank synonym: Fugu rubripes
synonym: Tetraodon rubripes
synonym: Takifugu rubripes (Temminck & Schlegel, 1850)
synonym: Sphaeroides rubripes
common name: tiger puffer
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Takifugu
   Entrez records   
Database name Subtree links Direct links
Nucleotide 51,734 51,723
Nucleotide EST 26,069 26,069
Nucleotide GSS 50,808 50,808
Protein 33,465 33,454
Structure 1 1
Genome 1 1
Popset 36 36
GEO Datasets 20 20
UniGene 3,800 3,800
PubMed Central 2,160 2,160
Gene 23,853 23,853
SRA Experiments 26 26
Probe 239 239
Assembly 2 2
Bio Project 12 12
Bio Sample 1,019 1,019
Bio Systems 337 337
Protein Clusters 13 13
Taxonomy 2 1

Comments and References:

Takifugu
The name Takifugu has priority over the name Fugu. For an explanation of this synonymy see: Matsuura, K. 1990. The pufferfish genus Fugu Abe, 1952, a junior subjective synonym of Takifugu Abe, 1949. Bull. Natn. Sci. Mus., Tokyo, Ser. A. 18(1):15-20.


Genome Information

Go to NCBI genomic BLAST page for Takifugu rubripes
Genome view: 22 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
SHOTGUN WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
- 3,527,053 3,527,053
NISC - NIH Intramural Sequencing Center
112,747 - 112,747
Totals per type
112,747 3,527,053 3,639,800

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
DNA barcoding : Takifugu rubripes taxonomy/phylogenetic Barcodes of Life
dryaddb supplemental materials Dryad Digital Repository
Takifugu rubripes (Temminck & Schlegel, 1850) taxonomy/phylogenetic Encyclopedia of life
GOLDCARD: Gi0010589 organism-specific Genomes On Line Database
GOLDCARD: Gi18232 organism-specific
Takifugu rubripes (Temminck and Schlegel, 1850) taxonomy/phylogenetic Integrated Taxonomic Information System
HGMP-RC Fugu Genomics Project taxonomy/phylogenetic NCBI taxonomy bookmarks
IMCB FUGU Genome Project taxonomy/phylogenetic
Takifugu rubripes taxonomy/phylogenetic Ocean Biogeographic Information System
Fugu rubripes taxonomy/phylogenetic TreeBase
Takifugu rubripes taxonomy/phylogenetic
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Takifugu rubripes organism-specific WebScipio - eukaryotic gene identification
Takifugu rubripes (Temminck & Schlegel, 1850) taxonomy/phylogenetic World Register of Marine Species
diArk: Takifugu rubripes organism-specific diArk a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.
To see LinkOut links in this lineage click here

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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