Taxonomy browser (Drosophila melanogaster)

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Taxonomy browser (Drosophila melanogaster)

Drosophila melanogaster

Taxonomy ID: 7227
Genbank common name: fruit fly
Inherited blast name: flies
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 5 (Invertebrate Mitochondrial)
Other names:

synonym:	Sophophora melanogaster
authority:	Sophophora melanogaster (Meigen, 1830)
authority:	Drosophila melanogaster Meigen, 1830

Lineage( full ): cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Eremoneura; Cyclorrhapha; Schizophora; Acalyptratae; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophilina; Drosophiliti; Drosophila; Sophophora; melanogaster group; melanogaster subgroup

Entrez records
Database name	Direct links
Nucleotide	211,952
Nucleotide EST	821,005
Nucleotide GSS	286,755
Protein	133,386
Structure	725
Genome	1
Popset	2,075
SNP	5,239,522
Domains	16
GEO Datasets	30,991
UniGene	17,151
PubMed Central	41,757
Gene	28,766
HomoloGene	7,016
SRA Experiments	20,698
Probe	148,470
Assembly	6
Bio Project	1,613
Bio Sample	24,610
Bio Systems	1,657
Clone DB	126,530
dbVar	17,483
Epigenomics	181
GEO Profiles	1,135,727
PubChem BioAssay	310
Protein Clusters	13
Taxonomy	1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Drosophila melanogaster

Genome view: 6 chromosomes
Names	X	2L	2R	3L	3R	4

Trace records (raw single-pass reads of DNA sequence)
Sequencing Center Name
Record counts per type
454	CLONEEND	PCR	PRIMERWALK	RT-PCR	SHOTGUN	TRANSPOSON	WGS	ALL
BCM - Baylor College of Medicine
-	-	-	-	-	258,692	-	3,692	262,384
BDGP - Berkeley Drosophila Genome Project
-	1,771	-	7,557	-	3,663,353	202,786	-	3,875,467
SC - The Sanger Center
-	-	-	65	-	-	-	-	65
WU-LCG - Washington University Laboratory for Computational Genomics
-	-	-	-	5,043	-	-	-	5,043
WUGSC - Washington University, Genome Sequencing Center
3,548,392	161,106	8,278	-	-	-	-	-	3,717,776
Totals per type
3,548,392	162,877	8,278	7,622	5,043	3,922,045	202,786	3,692	7,860,735

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Drosophila melanogaster	taxonomy/phylogenetic	Animal Diversity Web
Drosophila melanogaster taxonomy	taxonomy/phylogenetic	Arctos Specimen Database
DNA barcoding : Drosophila melanogaster	taxonomy/phylogenetic	Barcodes of Life
dryaddb	supplemental materials	Dryad Digital Repository
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Drosophila melanogaster Meigen, 1830	taxonomy/phylogenetic	Encyclopedia of life
GOLDCARD: Gi0057773	organism-specific	Genomes On Line Database
GOLDCARD: Gi0057732	organism-specific
GOLDCARD: Gi0045219	organism-specific
GOLDCARD: Gi0049832	organism-specific
GOLDCARD: Gi0010657	organism-specific
GOLDCARD: Gi0057774	organism-specific
GOLDCARD: Gi0064965	organism-specific
GOLDCARD: Gi0065068	organism-specific
GOLDCARD: Gi0069803	organism-specific
GOLDCARD: Gi0074054	organism-specific
GOLDCARD: Gi0045167	organism-specific
GOLDCARD: Gi0045166	organism-specific
GOLDCARD: Gi0045083	organism-specific
GOLDCARD: Gi0045069	organism-specific
GOLDCARD: Gi0044617	organism-specific
GOLDCARD: Gi0044548	organism-specific
GOLDCARD: Gi0044289	organism-specific
GOLDCARD: Gi0043412	organism-specific
GOLDCARD: Gi0045168	organism-specific
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
639538900: Drosophila melanogaster y; cn bw sp	organism-specific	Integrated Microbial Genomes
Drosophila melanogaster Meigen, 1830	taxonomy/phylogenetic	Integrated Taxonomic Information System
Drosophila melanogaster	images	MorphBank
EDGP	taxonomy/phylogenetic	NCBI taxonomy bookmarks
BDGP	taxonomy/phylogenetic
Drosophila Stock Center	taxonomy/phylogenetic
FlyBase	taxonomy/phylogenetic
Drosophila		Trans-NIH Model Organism Initiative
Drosophila melanogaster	taxonomy/phylogenetic	TreeBase
WebScipio: Drosophila melanogaster	organism-specific	WebScipio - eukaryotic gene identification
diArk: Drosophila melanogaster	organism-specific	diArk a resource for eukaryotic genome research
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.
To see LinkOut links in this lineage click here

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Comments and questions to info@ncbi.nlm.nih.gov

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