Similar articles for PMID: 38206813

Year	Number of Results
2008	2
2009	3
2010	2
2011	6
2012	4
2013	4
2014	3
2015	4
2016	7
2017	7
2018	6
2019	10
2020	18
2021	8
2022	15
2023	4
2024	2

1

ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry.

Zhang M, Huang H, Li J, Wu Q. Zhang M, et al. Cell Rep. 2024 Jan 23;43(1):113663. doi: 10.1016/j.celrep.2023.113663. Epub 2024 Jan 10. Cell Rep. 2024. PMID: 38206813 Free article.

2

ChIPr: accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features.

Abbas A, Chandratre K, Gao Y, Yuan J, Zhang MQ, Mani RS. Abbas A, et al. Genome Biol. 2024 Jan 12;25(1):15. doi: 10.1186/s13059-023-03158-7. Genome Biol. 2024. PMID: 38217027 Free PMC article.

3

Regulation of CTCF loop formation during pancreatic cell differentiation.

Lyu X, Rowley MJ, Kulik MJ, Dalton S, Corces VG. Lyu X, et al. Nat Commun. 2023 Oct 9;14(1):6314. doi: 10.1038/s41467-023-41964-6. Nat Commun. 2023. PMID: 37813869 Free PMC article.

4

Context-dependent perturbations in chromatin folding and the transcriptome by cohesin and related factors.

Nakato R, Sakata T, Wang J, Nagai LAE, Nagaoka Y, Oba GM, Bando M, Shirahige K. Nakato R, et al. Nat Commun. 2023 Sep 19;14(1):5647. doi: 10.1038/s41467-023-41316-4. Nat Commun. 2023. PMID: 37726281 Free PMC article.

5

CTCF and R-loops are boundaries of cohesin-mediated DNA looping.

Zhang H, Shi Z, Banigan EJ, Kim Y, Yu H, Bai XC, Finkelstein IJ. Zhang H, et al. Mol Cell. 2023 Aug 17;83(16):2856-2871.e8. doi: 10.1016/j.molcel.2023.07.006. Epub 2023 Aug 2. Mol Cell. 2023. PMID: 37536339

6

CTCF is a DNA-tension-dependent barrier to cohesin-mediated loop extrusion.

Davidson IF, Barth R, Zaczek M, van der Torre J, Tang W, Nagasaka K, Janissen R, Kerssemakers J, Wutz G, Dekker C, Peters JM. Davidson IF, et al. Nature. 2023 Apr;616(7958):822-827. doi: 10.1038/s41586-023-05961-5. Epub 2023 Apr 19. Nature. 2023. PMID: 37076620 Free PMC article.

7

A cohesin traffic pattern genetically linked to gene regulation.

Valton AL, Venev SV, Mair B, Khokhar ES, Tong AHY, Usaj M, Chan K, Pai AA, Moffat J, Dekker J. Valton AL, et al. Nat Struct Mol Biol. 2022 Dec;29(12):1239-1251. doi: 10.1038/s41594-022-00890-9. Epub 2022 Dec 8. Nat Struct Mol Biol. 2022. PMID: 36482254 Free PMC article.

8

Co-depletion of NIPBL and WAPL balance cohesin activity to correct gene misexpression.

Luppino JM, Field A, Nguyen SC, Park DS, Shah PP, Abdill RJ, Lan Y, Yunker R, Jain R, Adelman K, Joyce EF. Luppino JM, et al. PLoS Genet. 2022 Nov 30;18(11):e1010528. doi: 10.1371/journal.pgen.1010528. eCollection 2022 Nov. PLoS Genet. 2022. PMID: 36449519 Free PMC article.

9

Cohesin and CTCF complexes mediate contacts in chromatin loops depending on nucleosome positions.

Attou A, Zülske T, Wedemann G. Attou A, et al. Biophys J. 2022 Dec 20;121(24):4788-4799. doi: 10.1016/j.bpj.2022.10.044. Epub 2022 Nov 2. Biophys J. 2022. PMID: 36325618 Free PMC article.

10

Chromatin jets define the properties of cohesin-driven in vivo loop extrusion.

Guo Y, Al-Jibury E, Garcia-Millan R, Ntagiantas K, King JWD, Nash AJ, Galjart N, Lenhard B, Rueckert D, Fisher AG, Pruessner G, Merkenschlager M. Guo Y, et al. Mol Cell. 2022 Oct 20;82(20):3769-3780.e5. doi: 10.1016/j.molcel.2022.09.003. Epub 2022 Sep 30. Mol Cell. 2022. PMID: 36182691 Free article.

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